Help - Problem compiling OpenSees 2.2.2 in Ubuntu 10.04 LTS

[cmpolitis]

Hi, i've got Ubuntu 10.04 LTS (April 2010 release) and i'm trying to compile OpenSees 2.2.2.

[b]Steps Followed
1. First downloaded and unpacked OpenSees 2.2.2
2. In terminal entered the following command:
[/b]
~/$ sudo apt-get install build-essential gfortran gfortran-4.3 libatk1.0-dev libcairo2-dev libdirectfb-dev libdirectfb-extra libexpat1-dev libfontconfig1-dev libfreetype6-dev libgfortran3 libgl1-mesa-dev libglu1-mesa libglu1-mesa-dev libgtk2.0-dev libice-dev libjpeg62-dev libpango1.0-dev libpixman-1-dev libpng12-dev libpthread-stubs0 libpthread-stubs0-dev libsm-dev libsysfs-dev libx11-dev libxau-dev libxcb1-dev libxcb-render0-dev libxcb-render-util0-dev libxcomposite-dev libxcursor-dev libxdamage-dev libxdmcp-dev libxext-dev libxfixes-dev libxft-dev libxi-dev libxinerama-dev libxrandr-dev libxrender-dev libxss-dev mesa-common-dev tcl8.5 tcl8.5-dev tcllib tk8.5 tk8.5-dev x11proto-composite-dev x11proto-core-dev x11proto-damage-dev x11proto-fixes-dev x11proto-input-dev x11proto-kb-dev x11proto-randr-dev x11proto-render-dev x11proto-scrnsaver-dev x11proto-xext-dev x11proto-xinerama-dev xtrans-dev zlib1g-dev

That was for getting all "dependent files".

[b]then used the following "make file":[/b]

############################################################################
#
# Program: OpenSees
#
# Purpose: A Top-level Makefile to create the libraries needed
# to use the OpenSees framework.
#
# Written: fmk
# Created: 10/99
#
# Send bug reports, comments or suggestions to fmckenna@ce.berkeley.edu
#
############################################################################

include Makefile.def

############################################################################
#
# First, modify the definitions in Makefile.def to match
# your library archiver, compiler, and the options to be used.
#
# Sample Makefile.def's can be found in the directory MAKES
#
# Then to create or add to the libraries needed, enter make after having
# making the modifications to this file.
#
# The name of the libraries created and their placement are defined
# in the file called Makefile.def.
#
# To remove the object files after the libraries and testing executables
# are created, enter
# make clean
# To remove the object files and the libraries specified in WIPE_LIBS, enter
# make wipe
# To just make the libs, enter
# make lib
# To just build the interpreter type
# make OpenSees
############################################################################

all:
ifdef MKDIR
$(MKDIR) $(HOME)/OpenSees/bin
$(MKDIR) $(HOME)/OpenSees/lib
endif
@( \
for f in $(DIRS); \
do \
$(CD) $$f; \
$(MAKE); \
$(CD) ..; \
done );
@$(ECHO) LIBRARIES BUILT ... NOW LINKING OpenSees PROGRAM;
@$(CD) $(FE)/tcl; ./OSverCreate.sh ; $(MAKE) tcl; ./OSverRemove.sh
@$(CD) $(FE)/modelbuilder/tcl; $(MAKE) tcl;

OpenSees: tcl

tcl:
ifdef MKDIR
$(MKDIR) $(HOME)/OpenSees/bin
$(MKDIR) $(HOME)/OpenSees/lib
endif
@$(ECHO) Building OpenSees Program ..;
@$(CD) $(FE)/tcl; $(MAKE) tcl;
@$(CD) $(FE)/modelbuilder/tcl; $(MAKE) tcl;

OpenSeesTk: tk

tk:
@$(ECHO) Building OpenSees Program ..;
@$(CD) $(FE)/tcl; $(MAKE) tk;
@$(CD) $(FE)/modelbuilder/tcl; $(MAKE) tk;


libs:
@( \
for f in $(DIRS); \
do \
$(CD) $$f; \
$(MAKE); \
$(CD) ..; \
done );

clean:
@( \
for f in $(DIRS); \
do \
$(CD) $$f; \
$(ECHO) Making lib in $$f; \
$(MAKE) wipe; \
$(CD) ..; \
done );
@$(RM) $(RMFLAGS) *.o *~ core
@$(CD) $(FE)/../EXAMPLES; $(MAKE) wipe;

wipe:
@( \
for f in $(DIRS); \
do \
$(CD) $$f; \
$(ECHO) Making lib in $$f; \
$(MAKE) wipe; \
$(CD) ..; \
done );
@$(RM) $(RMFLAGS) $(WIPE_LIBS) *.o *~ core
@$(CD) $(FE)/../EXAMPLES; $(MAKE) wipe;

wipeall:
@( \
for f in $(DIRS); \
do \
$(CD) $$f; \
$(ECHO) Making lib in $$f; \
$(MAKE) wipe; \
$(CD) ..; \
done );
@$(RM) $(RMFLAGS) $(WIPE_LIBS) *.o *~ core
@$(CD) $(FE)/../EXAMPLES; $(MAKE) wipe
@$(RM) $(RMFLAGS) $(OpenSees_PROGRAM);

help:
@$(ECHO) "usage: make ?"

[b]and Makefile.def:
[/b]

############################################################################
#
# Programa: OpenSees
#
# Proposito: Makefile para crear las librerias necesarias
# para usar OpenSees framework. trabaja sobre Ubuntu 9.04.
#
#
# Escrito originalmente: fmk
# Created: 10/99
#
# Mandar reporte de fallas asi como comentarios y sugerencias a fmckenna@ce.berkeley.edu
#
############################################################################

# %---------------------------------%
# | SECTION 1: PROGRAM |
# %---------------------------------%
#
# Specify the location and name of the OpenSees interpreter program
# that will be created (if this all works!)

OpenSees_PROGRAM = $(HOME)/bin/opensees

OPERATING_SYSTEM = LINUX
GRAPHICS = UsingOpenGL
PROGRAMMING_MODE = SEQUENTIAL
DEBUG_MODE = NO_DEBUG
RELIABILITY = NO_RELIABILITY


# %---------------------------------%
# | SECTION 2: PATHS |
# %---------------------------------%
#
# Note: if vendor supplied BLAS and LAPACK libraries or if you have
# any of the libraries already leave the directory location blank AND
# remove the directory from DIRS.

BASE = /usr
HOME = /home/pipolinux/OpenSees
FE = $(HOME)/src/SRC

BLASdir = $(HOME)/src/OTHER/BLAS
CBLASdir = $(HOME)/src/OTHER/CBLAS
LAPACKdir = $(HOME)/src/OTHER/LAPACK
SUPERLUdir = $(HOME)/src/OTHER/SuperLU_3.0/SRC
ARPACKdir = $(HOME)/src/OTHER/ARPACK
UMFPACKdir = $(HOME)/src/OTHER/UMFPACK
METISdir = $(HOME)/src/OTHER/METIS
SRCdir = $(HOME)/SRC


DIRS = $(BLASdir) $(CBLASdir) $(LAPACKdir) \
$(SUPERLUdir) $(ARPACKdir) $(UMFPACKdir) $(SRCdir) $(METISdir)

# %-------------------------------------------------------%
# | SECTION 3: LIBRARIES |
# | |
# | The following section defines the libraries that will |
# | be created and/or linked with when the libraries are |
# | being created or linked with. |
# %-------------------------------------------------------%
#
# Note: if vendor supplied BLAS and LAPACK libraries leave the
# libraries blank. You have to get your own copy of the tcl/tk
# library!!
#
# Note: For libraries that will be created (any in DIRS above)
# make sure the directory exsists where you want the library to go!

FE_LIBRARY = $(HOME)/lib/libOpenSees.a
NDARRAY_LIBRARY = $(HOME)/lib/libndarray.a # BJ_UCD jeremic@ucdavis.edu
MATMOD_LIBRARY = $(HOME)/lib/libmatmod.a # BJ_UCD jeremic@ucdavis.edu
BJMISC_LIBRARY = $(HOME)/lib/libBJmisc.a # BJ_UCD jeremic@ucdavis.edu
LAPACK_LIBRARY = $(HOME)/lib/libLapack.a
BLAS_LIBRARY = $(HOME)/lib/libBlas.a
SUPERLU_LIBRARY = $(HOME)/lib/libSuperLU.a
CBLAS_LIBRARY = $(HOME)/lib/libCBlas.a
ARPACK_LIBRARY = $(HOME)/lib/libArpack.a
UMFPACK_LIBRARY = $(HOME)/lib/libUmfpack.a
METIS_LIBRARY = $(HOME)/lib/libMetis.a
TCL_LIBRARY = /usr/lib/libtk8.5.so /usr/lib/libX11.so /usr/lib/libtcl8.5.so
BLITZ_LIBRARY = $(HOME)/blitz/lib/libblitz.a
ifeq ($(GRAPHICS), UsingX11)
GRAPHIC_LIBRARY = -L/usr/lib/libX11.so
else
GRAPHIC_LIBRARY = -L/usr/lib -lX11 -lGL -lGLU
endif

# WATCH OUT .. These libraries are removed when 'make wipe' is invoked.
WIPE_LIBS = $(FE_LIBRARY) \
$(LAPACK_LIBRARY) \
$(BLAS_LIBRARY) \
$(CBLAS_LIBRARY) \
$(SUPERLU_LIBRARY) \
$(ARPACK_LIBRARY) \
$(UMFPACK_LIBRARY) \
$(METIS_LIBRARY)

# %---------------------------------------------------------%
# | SECTION 4: COMPILERS |
# | |
# | The following macros specify compilers, linker/loaders, |
# | the archiver, and their options. You need to make sure |
# | these are correct for your system. |
# %---------------------------------------------------------%

# Compilers
CC++ = /usr/bin/g++
CC = /usr/bin/gcc
FC = /usr/bin/gfortran

AR = ar
ARFLAGS = cqls
RANLIB = ranlib
RANLIBFLAGS =

# Compiler Flags
#
# NOTES:
# C++ FLAGS TAKE need _UNIX or _WIN32 for preprocessor dircetives
# - the _WIN32 for the Windows95/98 or NT operating system.
# C FLAGS used -DUSE_VENDOR_BLAS (needed in SuperLU) if UNIX in C++ FLAGS
#

# modified as optimizaton currently causing problems with Steeln01 code
ifeq ($(DEBUG_MODE), DEBUG)

C++FLAGS = -Wall -D_LINUX -D_UNIX -D_TCL85 \
$(GRAPHIC_FLAG) $(RELIABILITY_FLAG) $(DEBUG_FLAG) $(PROGRAMMING_FLAG) \
-g -pg


CFLAGS = -Wall -pg $(GRAPHIC_FLAG) $(RELIABILITY_FLAG) $(DEBUG_FLAG) $(PROGRAMMING_FLAG)
FFLAGS = -Wall

# Linker
LINKER = $(CC++)
LINKFLAGS = -g -pg

else

C++FLAGS = -Wall -D_LINUX -D_UNIX -D_TCL85 \
$(GRAPHIC_FLAG) $(RELIABILITY_FLAG) $(DEBUG_FLAG) \
$(PROGRAMMING_FLAG) -O3 -ffloat-store
CFLAGS = -Wall -O2
FFLAGS = -Wall -O

# Linker
LINKER = $(CC++)
LINKFLAGS = -rdynamic -Wl

endif


GRAPHIC_FLAG = -D_GLX

# Misc
MAKE = make
CD = cd
ECHO = echo
RM = rm
RMFLAGS = -f
SHELL = /bin/sh

# %---------------------------------------------------------%
# | SECTION 5: COMPILATION |
# | |
# | The following macros specify the macros used in |
# | to compile the source code into object code. |
# %---------------------------------------------------------%

.SUFFIXES:
.SUFFIXES: .C .c .f .f90 .cpp .o .cpp

#
# %------------------%
# | Default command. |
# %------------------%
#
.DEFAULT:
@$(ECHO) "Unknown target $@, try: make help"
#
# %-------------------------------------------%
# | Command to build .o files from .f files. |
# %-------------------------------------------%
#

.cpp.o:
@$(ECHO) Making $@ from $<
$(CC++) $(C++FLAGS) $(INCLUDES) -c $< -o $@

.C.o:
@$(ECHO) Making $@ from $<
$(CC++) $(C++FLAGS) $(INCLUDES) -c $< -o $@
.c.o:
@$(ECHO) Making $@ from $<
$(CC) $(CFLAGS) -c $< -o $@
.f.o:
@$(ECHO) Making $@ from $<
$(FC) $(FFLAGS) -c $< -o $@

# %---------------------------------------------------------%
# | SECTION 6: OTHER LIBRARIES |
# | |
# | The following macros specify other libraries that must |
# | be linked with when creating executables. These are |
# | platform specific and typically order does matter!! |
# %---------------------------------------------------------%
MACHINE_LINKLIBS = -L$(BASE)/lib \
-L$(HOME)/lib

MACHINE_NUMERICAL_LIBS = -lm \
$(ARPACK_LIBRARY) \
$(SUPERLU_LIBRARY) \
$(UMFPACK_LIBRARY) \
$(LAPACK_LIBRARY) $(BLAS_LIBRARY) $(CBLAS_LIBRARY) \
$(GRAPHIC_LIBRARY)\
-ldl -lgfortran -lpng

MACHINE_SPECIFIC_LIBS =



# %---------------------------------------------------------%
# | SECTION 7: INCLUDE FILES |
# | |
# | The following macros specify include files needed for |
# | compilation. |
# %---------------------------------------------------------%
MACHINE_INCLUDES = -I/usr/include \
-I$(BASE)/include \
-I/usr/include/c++/4.3 \
-I/usr/include/GL \
-I$(HOME)/include -I$(HOME)/blitz

# this file contains all the OpenSees/SRC includes
include $(FE)/Makefile.incl

TCL_INCLUDES = -I/usr/include/tcl8.5

INCLUDES = $(TCL_INCLUDES) $(FE_INCLUDES) $(MACHINE_INCLUDES)

[b]I'm getting the following error:[/b]

tkMain.cpp:112: error: new declaration ‘char* strrchr(const char*, int)’
/usr/include/string.h:253: error: ambiguates old declaration ‘const char* strrchr(const char*, int)’
tkMain.cpp: In function ‘void Tk_MainOpenSees(int, char**, int (*)(Tcl_Interp*), Tcl_Interp*)’:
tkMain.cpp:308: warning: deprecated conversion from string constant to ‘char*’
tkMain.cpp:325: warning: deprecated conversion from string constant to ‘char*’
make[2]: *** [tkMain.o] Error 1
make[2]: se sale del directorio `/home/pipolinux/OpenSees/src/SRC/tcl'
make[1]: *** [tk] Error 2
make[1]: se sale del directorio `/home/pipolinux/OpenSees/src/SRC/modelbuilder/tcl'
make: *** [all] Error 2


Any help I would be very grateful.

[fmk]

which compiler and version of the compiler are you using.

[ja_abell]

I'm having the same problem (Ubuntu 9.10 Karmic and Ubuntu 10.4 Lucid) using the g++4.4 compiler.

[ja_abell]

BTW, I compiled the previous version of OpenSees using my current settings and the same makefile.

[fmk]

look at tkMain.cpp and check whether the line containing the strrchr (112) is commented out .. it is in the current version .. if commented out, try deleting the line as it is obviously no longer needed.

[ja_abell]

Thank you frank,

Now into the next error. I'm getting the following:

/home/jose/lib/libOpenSees.a(AMDNumberer.o): In function `AMD::number(Graph&, int)':
AMDNumberer.cpp:(.text+0x191): undefined reference to `amd_order'
collect2: ld returned 1 exit status
make[1]: *** [tcl] Error 1
make[1]: Leaving directory `/home/jose/OpenSEES/SRC/modelbuilder/tcl'
make: *** [all] Error 2

Thanks

[ja_abell]

In the end it was not compiling the AMD library. I included this in the DIRS variable and the compile and link worked.
Now I need to compile for parallel processing.

Cheers.

[fmk]

i will try to respond more quickly if you have errors this time .. you can always shoot me en email & tell me to reply to something if i lag as chances are i have missed it or have forgotten about the problem.

[berlinguy]

hmmm i would try to debug the code...

[dtopuzi]

Hi ja_abell,

Could you compile the parallel version?

Thanks

[solarpanetr]

I accept with information: * Report this post
* Reply with quote

Help - Problem compiling OpenSees 2.2.2 in Ubuntu 10.04 LTS

Postby cmpolitis » Tue Nov 16, 2010 2:04 pm
Hi, i've got Ubuntu 10.04 LTS (April 2010 release) and i'm trying to compile OpenSees 2.2.2.

[b]Steps Followed
1. First downloaded and unpacked OpenSees 2.2.2
2. In terminal entered the following command:
[/b]
~/$ sudo apt-get install build-essential gfortran gfortran-4.3 libatk1.0-dev libcairo2-dev libdirectfb-dev libdirectfb-extra libexpat1-dev libfontconfig1-dev libfreetype6-dev libgfortran3 libgl1-mesa-dev libglu1-mesa libglu1-mesa-dev libgtk2.0-dev libice-dev libjpeg62-dev libpango1.0-dev libpixman-1-dev libpng12-dev libpthread-stubs0 libpthread-stubs0-dev libsm-dev libsysfs-dev libx11-dev libxau-dev libxcb1-dev libxcb-render0-dev libxcb-render-util0-dev libxcomposite-dev libxcursor-dev libxdamage-dev libxdmcp-dev libxext-dev libxfixes-dev libxft-dev libxi-dev libxinerama-dev libxrandr-dev libxrender-dev libxss-dev mesa-common-dev tcl8.5 tcl8.5-dev tcllib tk8.5 tk8.5-dev x11proto-composite-dev x11proto-core-dev x11proto-damage-dev x11proto-fixes-dev x11proto-input-dev x11proto-kb-dev x11proto-randr-dev x11proto-render-dev x11proto-scrnsaver-dev x11proto-xext-dev x11proto-xinerama-dev xtrans-dev zlib1g-dev

That was for getting all "dependent files".

[b]then used the following "make file":[/b]

############################################################################
#
# Program: OpenSees
#
# Purpose: A Top-level Makefile to create the libraries needed
# to use the OpenSees framework.
#
# Written: fmk
# Created: 10/99
#
# Send bug reports, comments or suggestions to fmckenna@ce.berkeley.edu
#
############################################################################

include Makefile.def

############################################################################
#
# First, modify the definitions in Makefile.def to match
# your library archiver, compiler, and the options to be used.
#
# Sample Makefile.def's can be found in the directory MAKES
#
# Then to create or add to the libraries needed, enter make after having
# making the modifications to this file.
#
# The name of the libraries created and their placement are defined
# in the file called Makefile.def.
#
# To remove the object files after the libraries and testing executables
# are created, enter
# make clean
# To remove the object files and the libraries specified in WIPE_LIBS, enter
# make wipe
# To just make the libs, enter
# make lib
# To just build the interpreter type
# make OpenSees
############################################################################

all:
ifdef MKDIR
$(MKDIR) $(HOME)/OpenSees/bin
$(MKDIR) $(HOME)/OpenSees/lib
endif
@( \
for f in $(DIRS); \
do \
$(CD) $$f; \
$(MAKE); \
$(CD) ..; \
done );
@$(ECHO) LIBRARIES BUILT ... NOW LINKING OpenSees PROGRAM;
@$(CD) $(FE)/tcl; ./OSverCreate.sh ; $(MAKE) tcl; ./OSverRemove.sh
@$(CD) $(FE)/modelbuilder/tcl; $(MAKE) tcl;

OpenSees: tcl

tcl:
ifdef MKDIR
$(MKDIR) $(HOME)/OpenSees/bin
$(MKDIR) $(HOME)/OpenSees/lib
endif
@$(ECHO) Building OpenSees Program ..;
@$(CD) $(FE)/tcl; $(MAKE) tcl;
@$(CD) $(FE)/modelbuilder/tcl; $(MAKE) tcl;

[joedyx]

Same problem with other compilers?

[hsafti]

I have installed tcl8.5, tk8.5, tcl8.5-dev, tk8.5-dev & tcllib
As I try to build OpenSees on Ubuntu 10.10 64bit, I get this error message.

compilation terminated.
make[1]: *** [TclModelBuilder.o] Error 1
make[1]: Leaving directory `/home/numubuntu/OpenSees/SRC/modelbuilder/tcl'
make: *** [all] Error 2


The problem seems to relate to Tcl header ... please advice

Edit: Compiler g++

[aneeman]

Try installing and linking to tcl8.4 instead -- that worked for me with Ubuntu 10.04

TCL_INCLUDES = -I/usr/include/tcl8.4 -I/usr/include/

INCLUDES = $(TCL_INCLUDES) $(FE_INCLUDES) $(MACHINE_INCLUDES)

[hsafti]

I have changed the TCL_INCLUDES variable in the Makefile.def file as you advised. However, the same message appeared. I also made 8.4 tcl installations and tried again but again the same message appeared. I then uninstalled tcl8.5 and tried again but no luck ... same msg!

Thanks for your effort .... I still need help!